Plot uncertainty around chosen selectivity ogive from MCMC.
Source:R/SSplotMCMC_ExtraSelex.R
SSplotMCMC_ExtraSelex.Rd
Plot uncertainty in selectivity from an MCMC output for whichever fleet/year was chosen in the optional extra "more stddev reporting"
Usage
SSplotMCMC_ExtraSelex(
post,
add = FALSE,
nsexes = 1,
shift = 0,
fleetname = "default",
col = "blue"
)
Arguments
- post
A data frame containing either derived_posteriors.sso or a good subset of it. This can be an element of the list created by the the
SSgetMCMC()
function.- add
TRUE/FALSE option to add results to an existing plot.
- nsexes
Number of sexes in the model (should match model values but is only used in the title).
- shift
Optional adjustment to the x values to avoid overlap of intervals when overplotting on an existing plot.
- fleetname
Optional input to make the title better. Default will be something like "Fleet 1", using the numbering from the model.
- col
Color for points and lines.