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Plot of recruitment distribution among areas and seasons

Source: R/SSplotRecdist.R
SSplotRecdist.Rd

Image plot shows fraction of recruitment in each combination of area and season. This is based on the RECRUITMENT_DIST section of the Report.sso file.

Usage

SSplotRecdist(
  replist,
  plot = TRUE,
  print = FALSE,
  areanames = NULL,
  seasnames = NULL,
  xlab = "",
  ylab = "",
  main = "Distribution of recruitment by area and season",
  plotdir = "default",
  pwidth = 6.5,
  pheight = 5,
  punits = "in",
  res = 300,
  ptsize = 10,
  cex.main = 1,
  verbose = TRUE
)

Arguments

replist

A list object created by SS_output().

plot

Plot to active plot device?

print

Print to PNG files?

areanames

optional vector to replace c("Area1","Area2",...)

seasnames

optional vector to replace c("Season1","Season2",...)

xlab

optional x-axis label (if the area names aren\'t informative enough)

ylab

optional y-axis label (if the season names aren\'t informative enough)

main

title for plot

plotdir

Directory where PNG files will be written.

pwidth

Default width of plots printed to files in units of punits.

pheight

Height of plots printed to png files in units of punits. Default is designed to allow two plots per page, with pheight_tall used for plots that work best with a taller format and a single plot per page.

punits

Units for pwidth and pheight. Can be "px" (pixels), "in" (inches), "cm" (centimeters), or "mm" (millimeters). The default is punits="in".

res

Resolution of plots printed to files. The default is res = 300.

ptsize

Point size for plotted text in plots printed to files (see help("png") in R for details).

cex.main

Character expansion for plot titles. The default is cex.main=1.

verbose

A logical value specifying if output should be printed to the screen.

See also

SS_plots(), SSplotRecdevs()

Author

Ian Taylor