Plot unavailable spawning output — SSunavailableSpawningOutput • r4ss

Calculate and plot the unavailable spawning output- separating out ones that are unavailable because they're too small to be selected from ones that are too big to be selected

Usage

SSunavailableSpawningOutput(
  replist,
  plot = TRUE,
  print = FALSE,
  plotdir = "default",
  pwidth = 6.5,
  pheight = 5,
  punits = "in",
  res = 300,
  ptsize = 10,
  cex.main = 1
)

Arguments

replist: A list object created by SS_output().
plot: Plot to active plot device?
print: Print to PNG files?
plotdir: Directory where PNG files will be written.
pwidth: Default width of plots printed to files in units of punits.
pheight: Height of plots printed to png files in units of punits. Default is designed to allow two plots per page, with pheight_tall used for plots that work best with a taller format and a single plot per page.
punits: Units for pwidth and pheight. Can be "px" (pixels), "in" (inches), "cm" (centimeters), or "mm" (millimeters). The default is punits="in".
res: Resolution of plots printed to files. The default is res = 300.
ptsize: Point size for plotted text in plots printed to files (see help("png") in R for details).
cex.main: Character expansion for plot titles. The default is cex.main=1.

Author

Megan Stachura, Andrew Cooper, Andi Stephens, Neil Klaer, Ian G. Taylor